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Fast fluorometric enumeration of E. coli using passive chip

dc.authoridTamer, Ugur/0000-0001-9989-6123
dc.authoridSuludere, Zekiye/0000-0002-1207-5814
dc.authoridCetin, Demet/0000-0003-1186-4229
dc.authoridYildirim, Ender/0000-0002-7969-2243
dc.authorscopusid57188994126
dc.authorscopusid56490357500
dc.authorscopusid56789993500
dc.authorscopusid36165070100
dc.authorscopusid6603211547
dc.authorscopusid57661109900
dc.authorscopusid6603028058
dc.authorwosidSuludere, Zekiye/Gln-6018-2022
dc.authorwosidCetin, Demet/Aag-5793-2019
dc.authorwosidDogan, Uzeyir/Kfs-9584-2024
dc.authorwosidBoyaci, Ismail/A-5255-2013
dc.authorwosidErtas, Nusret/Ahe-8075-2022
dc.authorwosidYıldırım, Ender/K-3962-2019
dc.authorwosidTamer, Ugur/Afs-5115-2022
dc.contributor.authorÇoğun, Ferah
dc.contributor.authorKasap, Esin Nagihan
dc.contributor.authorDogan, Uzeyir
dc.contributor.authorYıldırım, Ender
dc.contributor.authorCogun, Ferah
dc.contributor.authorYildirim, Ender
dc.contributor.authorBoyaci, Ismail Haklu
dc.contributor.authorCetin, Demet
dc.contributor.authorErtas, Nusret
dc.date.accessioned2020-02-07T13:00:02Z
dc.date.available2020-02-07T13:00:02Z
dc.date.issued2019
dc.departmentÇankaya Universityen_US
dc.department-temp[Kasap, Esin Nagihan; Dogan, Uzeyir; Tamer, Ugur; Ertas, Nusret] Gazi Univ, Fac Pharm, Dept Analyt Chem, TR-06330 Ankara, Turkey; [Cogun, Ferah; Yildirim, Ender] Cankaya Univ, Dept Mech Engn, TR-06790 Ankara, Turkey; [Boyaci, Ismail Haklu] Hacettepe Univ, Fac Engn, Dept Food Engn, TR-06800 Ankara, Turkey; [Cetin, Demet] Gazi Univ, Gazi Fac Educ, Dept Math & Sci Educ, TR-06500 Ankara, Turkey; [Suludere, Zekiye] Gazi Univ, Fac Sci, Dept Biol, TR-06500 Ankara, Turkeyen_US
dc.descriptionTamer, Ugur/0000-0001-9989-6123; Suludere, Zekiye/0000-0002-1207-5814; Cetin, Demet/0000-0003-1186-4229; Yildirim, Ender/0000-0002-7969-2243en_US
dc.description.abstractIn this report, a passive microfluidic chip design was developed for fast and sensitive fluorometric determination of Escherichia coli (E. coli) based on sandwich immunoassay. Initially, magnetic nanoparticles (MNPs) and chitosan modified mercaptopropionic acid capped cadmium telluride (CdTe) quantum dots (QDs) were functionalized with E.coli specific antibody to form a sandwich immunoassay with the E. coli. The magnetic separation and preconcentration of the E.coli from the sample solution was performed in the vial. Conjugation of QDs to the magnetically captured E. coli and washing were performed using a passive type of microchip. The microfluidic chip consists of four microchambers connected to each other by microchannels which act as capillary valves. Signal measurement was performed at the last chamber by using a hand-held spectrofluorometer equipped with a fiber optic reflection probe. The selectivity of the method was tested with Enterobacter aerogenes (E. aerogenes) and Salmonella enteritidis (S. enteritidis), it was observed that these bacteria have no interference effect on E.coli determination. The calibration curve was found to be linear in the range of 10(1)-10(5) cfu/mL with a correlation coefficient higher than 0.99. The limit of detection was calculated as 5 cfu/mL. The method was successfully applied to spiked tap and lake water samples. The results suggest that the developed method is applicable for on-site E. coli detection and offers several advantages such as large dynamic range, high sensitivity, high selectivity and short analysis time.en_US
dc.description.publishedMonth9
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK) [114Z408]en_US
dc.description.sponsorshipThis work was supported by the Scientific and Technological Research Council of Turkey (TUBITAK) with grant number 114Z408.en_US
dc.description.woscitationindexScience Citation Index Expanded
dc.identifier.citationKasap, Esin Nagihan...et al., "Fast fluorometric enumeration of E. coli using passive chip", Journal of Microbiological Methods, Vol. 164, (2019).en_US
dc.identifier.doi10.1016/j.mimet.2019.105680
dc.identifier.issn0167-7012
dc.identifier.issn1872-8359
dc.identifier.pmid31381980
dc.identifier.scopus2-s2.0-85070256735
dc.identifier.scopusqualityQ3
dc.identifier.urihttps://doi.org/10.1016/j.mimet.2019.105680
dc.identifier.volume164en_US
dc.identifier.wosWOS:000487171800014
dc.identifier.wosqualityQ3
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectE. Coilen_US
dc.subjectMicrofluidic Chipen_US
dc.subjectImmunornagnetic Separationen_US
dc.subjectFluorescenceen_US
dc.subjectSandwich Immunoassayen_US
dc.titleFast fluorometric enumeration of E. coli using passive chiptr_TR
dc.titleFast Fluorometric Enumeration of E. Coli Using Passive Chipen_US
dc.typeArticleen_US
dspace.entity.typePublication
relation.isAuthorOfPublication2f8f183a-f00f-49fd-ab01-3e2ecc1d8b68
relation.isAuthorOfPublication8f09d499-bbdb-4f2a-8fd5-9a2e648a5eac
relation.isAuthorOfPublication.latestForDiscovery2f8f183a-f00f-49fd-ab01-3e2ecc1d8b68

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