Fast fluorometric enumeration of E. coli using passive chip
dc.authorid | Tamer, Ugur/0000-0001-9989-6123 | |
dc.authorid | Suludere, Zekiye/0000-0002-1207-5814 | |
dc.authorid | Cetin, Demet/0000-0003-1186-4229 | |
dc.authorid | Yildirim, Ender/0000-0002-7969-2243 | |
dc.authorscopusid | 57188994126 | |
dc.authorscopusid | 56490357500 | |
dc.authorscopusid | 56789993500 | |
dc.authorscopusid | 36165070100 | |
dc.authorscopusid | 6603211547 | |
dc.authorscopusid | 57661109900 | |
dc.authorscopusid | 6603028058 | |
dc.authorwosid | Suludere, Zekiye/Gln-6018-2022 | |
dc.authorwosid | Cetin, Demet/Aag-5793-2019 | |
dc.authorwosid | Dogan, Uzeyir/Kfs-9584-2024 | |
dc.authorwosid | Boyaci, Ismail/A-5255-2013 | |
dc.authorwosid | Ertas, Nusret/Ahe-8075-2022 | |
dc.authorwosid | Yıldırım, Ender/K-3962-2019 | |
dc.authorwosid | Tamer, Ugur/Afs-5115-2022 | |
dc.contributor.author | Çoğun, Ferah | |
dc.contributor.author | Kasap, Esin Nagihan | |
dc.contributor.author | Dogan, Uzeyir | |
dc.contributor.author | Yıldırım, Ender | |
dc.contributor.author | Cogun, Ferah | |
dc.contributor.author | Yildirim, Ender | |
dc.contributor.author | Boyaci, Ismail Haklu | |
dc.contributor.author | Cetin, Demet | |
dc.contributor.author | Ertas, Nusret | |
dc.date.accessioned | 2020-02-07T13:00:02Z | |
dc.date.available | 2020-02-07T13:00:02Z | |
dc.date.issued | 2019 | |
dc.department | Çankaya University | en_US |
dc.department-temp | [Kasap, Esin Nagihan; Dogan, Uzeyir; Tamer, Ugur; Ertas, Nusret] Gazi Univ, Fac Pharm, Dept Analyt Chem, TR-06330 Ankara, Turkey; [Cogun, Ferah; Yildirim, Ender] Cankaya Univ, Dept Mech Engn, TR-06790 Ankara, Turkey; [Boyaci, Ismail Haklu] Hacettepe Univ, Fac Engn, Dept Food Engn, TR-06800 Ankara, Turkey; [Cetin, Demet] Gazi Univ, Gazi Fac Educ, Dept Math & Sci Educ, TR-06500 Ankara, Turkey; [Suludere, Zekiye] Gazi Univ, Fac Sci, Dept Biol, TR-06500 Ankara, Turkey | en_US |
dc.description | Tamer, Ugur/0000-0001-9989-6123; Suludere, Zekiye/0000-0002-1207-5814; Cetin, Demet/0000-0003-1186-4229; Yildirim, Ender/0000-0002-7969-2243 | en_US |
dc.description.abstract | In this report, a passive microfluidic chip design was developed for fast and sensitive fluorometric determination of Escherichia coli (E. coli) based on sandwich immunoassay. Initially, magnetic nanoparticles (MNPs) and chitosan modified mercaptopropionic acid capped cadmium telluride (CdTe) quantum dots (QDs) were functionalized with E.coli specific antibody to form a sandwich immunoassay with the E. coli. The magnetic separation and preconcentration of the E.coli from the sample solution was performed in the vial. Conjugation of QDs to the magnetically captured E. coli and washing were performed using a passive type of microchip. The microfluidic chip consists of four microchambers connected to each other by microchannels which act as capillary valves. Signal measurement was performed at the last chamber by using a hand-held spectrofluorometer equipped with a fiber optic reflection probe. The selectivity of the method was tested with Enterobacter aerogenes (E. aerogenes) and Salmonella enteritidis (S. enteritidis), it was observed that these bacteria have no interference effect on E.coli determination. The calibration curve was found to be linear in the range of 10(1)-10(5) cfu/mL with a correlation coefficient higher than 0.99. The limit of detection was calculated as 5 cfu/mL. The method was successfully applied to spiked tap and lake water samples. The results suggest that the developed method is applicable for on-site E. coli detection and offers several advantages such as large dynamic range, high sensitivity, high selectivity and short analysis time. | en_US |
dc.description.publishedMonth | 9 | |
dc.description.sponsorship | Scientific and Technological Research Council of Turkey (TUBITAK) [114Z408] | en_US |
dc.description.sponsorship | This work was supported by the Scientific and Technological Research Council of Turkey (TUBITAK) with grant number 114Z408. | en_US |
dc.description.woscitationindex | Science Citation Index Expanded | |
dc.identifier.citation | Kasap, Esin Nagihan...et al., "Fast fluorometric enumeration of E. coli using passive chip", Journal of Microbiological Methods, Vol. 164, (2019). | en_US |
dc.identifier.doi | 10.1016/j.mimet.2019.105680 | |
dc.identifier.issn | 0167-7012 | |
dc.identifier.issn | 1872-8359 | |
dc.identifier.pmid | 31381980 | |
dc.identifier.scopus | 2-s2.0-85070256735 | |
dc.identifier.scopusquality | Q3 | |
dc.identifier.uri | https://doi.org/10.1016/j.mimet.2019.105680 | |
dc.identifier.volume | 164 | en_US |
dc.identifier.wos | WOS:000487171800014 | |
dc.identifier.wosquality | Q3 | |
dc.language.iso | en | en_US |
dc.publisher | Elsevier | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | E. Coil | en_US |
dc.subject | Microfluidic Chip | en_US |
dc.subject | Immunornagnetic Separation | en_US |
dc.subject | Fluorescence | en_US |
dc.subject | Sandwich Immunoassay | en_US |
dc.title | Fast fluorometric enumeration of E. coli using passive chip | tr_TR |
dc.title | Fast Fluorometric Enumeration of E. Coli Using Passive Chip | en_US |
dc.type | Article | en_US |
dspace.entity.type | Publication | |
relation.isAuthorOfPublication | 2f8f183a-f00f-49fd-ab01-3e2ecc1d8b68 | |
relation.isAuthorOfPublication | 8f09d499-bbdb-4f2a-8fd5-9a2e648a5eac | |
relation.isAuthorOfPublication.latestForDiscovery | 2f8f183a-f00f-49fd-ab01-3e2ecc1d8b68 |
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